RNAJunction Database - Junction Profile:2053

Links: Download Junction Jmol Scanner Output PDB SCOR MMDB

Entry # 2053: 1K01_j4_A-U1680_A-U1723_A-G1742_A-C1971

Primary Citation: (from PDB entry 1K01)

F.SCHLUENZEN R.ZARIVACH J.HARMS A.BASHAN A.TOCILJ R.ALBRECHT A.YONATH F.FRANCESCHI STRUCTURAL BASIS FOR THE INTERACTION OF ANTIBIOTICS WITH THE PEPTIDYL TRANSFERASE CENTRE IN EUBACTERIA NATURE V. 413 814 2001

Experimental Method: X-RAY_DIFFRACTION

Structure Images
3d structure of junction secondary structure of junction

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Derived Information
Type:4-wayCluster:2OGM j4 0-U1680 0-U1723 0-G1742 0-C1971 
NC-IUBMB Classification:Cluster Page
Angles: 23:50:66:93:120:142°
Fit Criteria: A
Extracted Structure:Download
Minimized Structure:Download RMSD = 0.80346Å

For more detailed information view the raw JunctionScanner output.

Sequence

Strand 1: Chain A: GGUCCC 6nt

Strand 2: Chain A: GUUAAGGAACUUUGCAAUCUCACC 24nt

Strand 3: Chain A: GGGCGCAGUGAAUAGGCC 18nt

Strand 4: Chain A: GGCGCUGUCUCAAC 14nt

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