#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS1HS2
FINGERPRINT = 163
LOOP_LENGTH_SUM = 3
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  4
S1_NAME_ID3 = 10
S1_NUM_ID5_ORIG =  4
S1_NUM_ID3_ORIG = 10
S1_NAME2_ID5 =  6
S1_NAME2_ID3 = 8
S1_NUM2_ID5_ORIG =  6
S1_NUM2_ID3_ORIG = 8
S1_SQ2 = CAC
S1_SQLEN2 = 3
S1_SQ = GUCACAC
S1_SQLEN = 7
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  35
S2_NAME_ID3 = 42
S2_NUM_ID5_ORIG =  35
S2_NUM_ID3_ORIG = 42
S2_NAME2_ID5 =  37
S2_NAME2_ID3 = 40
S2_NUM2_ID5_ORIG =  37
S2_NUM2_ID3_ORIG = 40
S2_SQ2 = GAAG
S2_SQLEN2 = 4
S2_SQ = GUGAAGUC
S2_SQLEN = 8
S2_CHAR = B
## Properties of helix 1
H1_INID = 1
H1_OUTID = 8
H1_INID2 = 3
H1_OUTID2 = 6
H1_INID2_ORIG = 6
H1_OUTID2_ORIG = 40
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = B
# Position:
H1_P_X = 37.72280308143707
H1_P_Y = 1.769949251868141
H1_P_Z = 55.61156422977015
# Orientation:
H1_DX_X = 0.6779268610586797
H1_DX_Y = 0.6289707199058467
H1_DX_Z = 0.3805404111999735
H1_DY_X = -0.3025910705431798
H1_DY_Y = -0.23301583638572088
H1_DY_Z = 0.9241981735650597
H1_DZ_X = 0.6699655327572174
H1_DZ_Y = -0.7416868972110677
H1_DZ_Z = 0.03235322893868897
## Properties of helix 2
H2_INID = 1
H2_OUTID = 7
H2_INID2 = 3
H2_OUTID2 = 5
H2_INID2_ORIG = 37
H2_OUTID2_ORIG = 8
H2_INSEQ_CHAR = B
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 24.317985112072343
H2_P_Y = 18.052946528653834
H2_P_Z = 59.21263608805897
# Orientation:
H2_DX_X = -0.14355303192468938
H2_DX_Y = 0.18526038196630168
H2_DX_Z = -0.972147683173155
H2_DY_X = -0.8169937546070294
H2_DY_Y = -0.5765459172349559
H2_DY_Z = 0.010770805578772524
H2_DZ_X = -0.5584923741272938
H2_DZ_Y = 0.7957847675052605
H2_DZ_Z = 0.23412148950546197
#############  END of Description of junction: j1