############# Start of Description of junction: j13 # Number of strands: NUM_STRANDS = 7 LILLEY = 2HS2HS3HS3HS2HS2HS6 FINGERPRINT = 30:39:41:43:62:63:64:76:91:101:102:104:119:125:130:131:134:142:143:157:164 LOOP_LENGTH_SUM = 18 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 926 S1_NAME_ID3 = 931 S1_NUM_ID5_ORIG = 926 S1_NUM_ID3_ORIG = 931 S1_NAME2_ID5 = 928 S1_NAME2_ID3 = 929 S1_NUM2_ID5_ORIG = 928 S1_NUM2_ID3_ORIG = 929 S1_SQ2 = GA S1_SQLEN2 = 2 S1_SQ = AUGACC S1_SQLEN = 6 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 910 S2_NAME_ID3 = 917 S2_NUM_ID5_ORIG = 910 S2_NUM_ID3_ORIG = 917 S2_NAME2_ID5 = 912 S2_NAME2_ID3 = 915 S2_NUM2_ID5_ORIG = 912 S2_NUM2_ID3_ORIG = 915 S2_SQ2 = AAAC S2_SQLEN2 = 4 S2_SQ = CGAAACAU S2_SQLEN = 8 S2_CHAR = A ## Properties of strand 3 S3_NAME_ID5 = 1039 S3_NAME_ID3 = 1047 S3_NUM_ID5_ORIG = 1039 S3_NUM_ID3_ORIG = 1047 S3_NAME2_ID5 = 1041 S3_NAME2_ID3 = 1045 S3_NUM2_ID5_ORIG = 1041 S3_NUM2_ID3_ORIG = 1045 S3_SQ2 = UUCCG S3_SQLEN2 = 5 S3_SQ = GAUUCCGGU S3_SQLEN = 9 S3_CHAR = A ## Properties of strand 4 S4_NAME_ID5 = 1067 S4_NAME_ID3 = 1075 S4_NUM_ID5_ORIG = 1067 S4_NUM_ID3_ORIG = 1075 S4_NAME2_ID5 = 1069 S4_NAME2_ID3 = 1073 S4_NUM2_ID5_ORIG = 1069 S4_NUM2_ID3_ORIG = 1073 S4_SQ2 = CAGGA S4_SQLEN2 = 5 S4_SQ = ACCAGGAGG S4_SQLEN = 9 S4_CHAR = A ## Properties of strand 5 S5_NAME_ID5 = 1084 S5_NAME_ID3 = 1091 S5_NUM_ID5_ORIG = 1084 S5_NUM_ID3_ORIG = 1091 S5_NAME2_ID5 = 1086 S5_NAME2_ID3 = 1089 S5_NUM2_ID5_ORIG = 1086 S5_NUM2_ID3_ORIG = 1089 S5_SQ2 = AGAG S5_SQLEN2 = 4 S5_SQ = CCAGAGAU S5_SQLEN = 8 S5_CHAR = A ## Properties of strand 6 S6_NAME_ID5 = 1265 S6_NAME_ID3 = 1272 S6_NUM_ID5_ORIG = 1265 S6_NUM_ID3_ORIG = 1272 S6_NAME2_ID5 = 1267 S6_NAME2_ID3 = 1270 S6_NUM2_ID5_ORIG = 1267 S6_NUM2_ID3_ORIG = 1270 S6_SQ2 = CCGU S6_SQLEN2 = 4 S6_SQ = GUCCGUAC S6_SQLEN = 8 S6_CHAR = A ## Properties of strand 7 S7_NAME_ID5 = 1284 S7_NAME_ID3 = 1295 S7_NUM_ID5_ORIG = 1284 S7_NUM_ID3_ORIG = 1295 S7_NAME2_ID5 = 1286 S7_NAME2_ID3 = 1293 S7_NUM2_ID5_ORIG = 1286 S7_NUM2_ID3_ORIG = 1293 S7_SQ2 = AAUCGAGU S7_SQLEN2 = 8 S7_SQ = GUAAUCGAGUAG S7_SQLEN = 12 S7_CHAR = A ## Properties of helix 1 H1_INID = 1 H1_OUTID = 8 H1_INID2 = 3 H1_OUTID2 = 6 H1_INID2_ORIG = 928 H1_OUTID2_ORIG = 915 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = A # Position: H1_P_X = 58.192025405774764 H1_P_Y = 92.09093575279873 H1_P_Z = 81.22824920739401 # Orientation: H1_DX_X = 0.14802073305301633 H1_DX_Y = -0.9863717281825615 H1_DX_Z = 0.0718378481622608 H1_DY_X = 0.2392621193567379 H1_DY_Y = -0.03476462247813572 H1_DY_Z = -0.9703324478058448 H1_DZ_X = 0.9596059091248677 H1_DZ_Y = 0.16081739603068002 H1_DZ_Z = 0.23085550525500764 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 6 H2_INID2 = 3 H2_OUTID2 = 4 H2_INID2_ORIG = 1041 H2_OUTID2_ORIG = 929 H2_INSEQ_CHAR = A H2_OUTSEQ_CHAR = A # Position: H2_P_X = 41.44904862124877 H2_P_Y = 84.16509385318669 H2_P_Z = 71.02180741790511 # Orientation: H2_DX_X = -0.4252391605346517 H2_DX_Y = 0.43901857090844487 H2_DX_Z = 0.791476058226209 H2_DY_X = -0.3486838050679637 H2_DY_Y = 0.7275166596864437 H2_DY_Z = -0.5908799488576477 H2_DZ_X = -0.8352192888284549 H2_DZ_Y = -0.5272401770314872 H2_DZ_Z = -0.1562899078401898 ## Properties of helix 3 H3_INID = 1 H3_OUTID = 9 H3_INID2 = 3 H3_OUTID2 = 7 H3_INID2_ORIG = 1069 H3_OUTID2_ORIG = 1045 H3_INSEQ_CHAR = A H3_OUTSEQ_CHAR = A # Position: H3_P_X = 47.75971204635291 H3_P_Y = 90.13228821294098 H3_P_Z = 98.35886911858847 # Orientation: H3_DX_X = -0.21444852892728505 H3_DX_Y = 0.9182299242665692 H3_DX_Z = 0.33296491500209413 H3_DY_X = -0.7523731410902315 H3_DY_Y = -0.3726792976665365 H3_DY_Z = 0.5431802625802931 H3_DZ_X = 0.6228535020427657 H3_DZ_Y = -0.1340296507202794 H3_DZ_Z = 0.7707720595097243 ## Properties of helix 4 H4_INID = 1 H4_OUTID = 9 H4_INID2 = 3 H4_OUTID2 = 7 H4_INID2_ORIG = 1086 H4_OUTID2_ORIG = 1073 H4_INSEQ_CHAR = A H4_OUTSEQ_CHAR = A # Position: H4_P_X = 33.1456633424564 H4_P_Y = 102.59117762580027 H4_P_Z = 104.16985252166502 # Orientation: H4_DX_X = -0.9824103500760799 H4_DX_Y = 0.16718202468116772 H4_DX_Z = 0.08318698628335142 H4_DY_X = -0.03625669126181208 H4_DY_Y = -0.6077774373882932 H4_DY_Z = 0.7932792944105245 H4_DZ_X = 0.1831812119245484 H4_DZ_Y = 0.7763097044512648 H4_DZ_Z = 0.6031483120863612 ## Properties of helix 5 H5_INID = 1 H5_OUTID = 8 H5_INID2 = 3 H5_OUTID2 = 6 H5_INID2_ORIG = 1267 H5_OUTID2_ORIG = 1089 H5_INSEQ_CHAR = A H5_OUTSEQ_CHAR = A # Position: H5_P_X = 12.388963397597408 H5_P_Y = 97.95591786094872 H5_P_Z = 94.21051139105745 # Orientation: H5_DX_X = -0.13374021279640758 H5_DX_Y = 0.9300119533553755 H5_DX_Z = -0.3423321809256521 H5_DY_X = -0.9727344312161517 H5_DY_Y = -0.05714701485464957 H5_DY_Z = 0.22477087226729964 H5_DZ_X = 0.18947633574612155 H5_DZ_Y = 0.3630592035871558 H5_DZ_Z = 0.9122975023986868 ## Properties of helix 6 H6_INID = 1 H6_OUTID = 8 H6_INID2 = 3 H6_OUTID2 = 6 H6_INID2_ORIG = 1286 H6_OUTID2_ORIG = 1270 H6_INSEQ_CHAR = A H6_OUTSEQ_CHAR = A # Position: H6_P_X = 10.523319125230557 H6_P_Y = 90.6631941770254 H6_P_Z = 72.95205478876288 # Orientation: H6_DX_X = 0.7006725350472198 H6_DX_Y = -0.6622534249239465 H6_DX_Z = 0.265477682314355 H6_DY_X = -0.7094389339509046 H6_DY_Y = -0.6862368732388973 H6_DY_Z = 0.16054704233306438 H6_DZ_X = 0.07585774597964345 H6_DZ_Y = -0.30083110707468563 H6_DZ_Z = -0.9506556933985593 ## Properties of helix 7 H7_INID = 1 H7_OUTID = 12 H7_INID2 = 3 H7_OUTID2 = 10 H7_INID2_ORIG = 912 H7_OUTID2_ORIG = 1293 H7_INSEQ_CHAR = A H7_OUTSEQ_CHAR = A # Position: H7_P_X = 31.358836383310564 H7_P_Y = 100.32045304344399 H7_P_Z = 77.99175816039492 # Orientation: H7_DX_X = 0.9596359158255616 H7_DX_Y = -0.22535306118463438 H7_DX_Z = -0.16827033865881447 H7_DY_X = -0.2742446117258375 H7_DY_Y = -0.8824479380913459 H7_DY_Z = -0.382198285576564 H7_DZ_X = -0.06236025975720594 H7_DZ_Y = 0.4129184354966924 H7_DZ_Z = -0.9086305980044784 ############# END of Description of junction: j13