#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = 3HS3HS1
FINGERPRINT = 19:35:150:153:166:167
LOOP_LENGTH_SUM = 4
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  130
S1_NAME_ID3 = 133
S1_NUM_ID5_ORIG =  130
S1_NUM_ID3_ORIG = 133
S1_NAME2_ID5 =  131
S1_NAME2_ID3 = 132
S1_NUM2_ID5_ORIG =  131
S1_NUM2_ID3_ORIG = 132
S1_SQ2 = UU
S1_SQLEN2 = 2
S1_SQ = AUUU
S1_SQLEN = 4
S1_CHAR = C
## Properties of strand 2
S2_NAME_ID5 =  105
S2_NAME_ID3 = 108
S2_NUM_ID5_ORIG =  105
S2_NUM_ID3_ORIG = 108
S2_NAME2_ID5 =  106
S2_NAME2_ID3 = 107
S2_NUM2_ID5_ORIG =  106
S2_NUM2_ID3_ORIG = 107
S2_SQ2 = GA
S2_SQLEN2 = 2
S2_SQ = GGAU
S2_SQLEN = 4
S2_CHAR = C
## Properties of strand 3
S3_NAME_ID5 =  135
S3_NAME_ID3 = 141
S3_NUM_ID5_ORIG =  135
S3_NUM_ID3_ORIG = 141
S3_NAME2_ID5 =  136
S3_NAME2_ID3 = 140
S3_NUM2_ID5_ORIG =  136
S3_NUM2_ID3_ORIG = 140
S3_SQ2 = AGAAA
S3_SQLEN2 = 5
S3_SQ = AAGAAAG
S3_SQLEN = 7
S3_CHAR = C
## Properties of strand 4
S4_NAME_ID5 =  150
S4_NAME_ID3 = 154
S4_NUM_ID5_ORIG =  150
S4_NUM_ID3_ORIG = 154
S4_NAME2_ID5 =  151
S4_NAME2_ID3 = 153
S4_NUM2_ID5_ORIG =  151
S4_NUM2_ID3_ORIG = 153
S4_SQ2 = UCA
S4_SQLEN2 = 3
S4_SQ = CUCAC
S4_SQLEN = 5
S4_CHAR = C
## Properties of helix 1
H1_INID = 1
H1_OUTID = 4
H1_INID2 = 2
H1_OUTID2 = 3
H1_INID2_ORIG = 131
H1_OUTID2_ORIG = 107
H1_INSEQ_CHAR = C
H1_OUTSEQ_CHAR = C
# Position:
H1_P_X = 93.38132711519911
H1_P_Y = 96.45279164196641
H1_P_Z = 19.061103501945755
# Orientation:
H1_DX_X = -0.24707831520379386
H1_DX_Y = -0.11339836822040184
H1_DX_Z = -0.9623373193641633
H1_DY_X = -0.9149627417203448
H1_DY_Y = -0.2996977993693264
H1_DY_Z = 0.2702302912642587
H1_DZ_X = -0.3190540509375097
H1_DZ_Y = 0.9472708372678511
H1_DZ_Z = -0.02970645455508958
## Properties of helix 2
H2_INID = 1
H2_OUTID = 4
H2_INID2 = 2
H2_OUTID2 = 3
H2_INID2_ORIG = 136
H2_OUTID2_ORIG = 132
H2_INSEQ_CHAR = C
H2_OUTSEQ_CHAR = C
# Position:
H2_P_X = 94.53695343096115
H2_P_Y = 79.71415485944688
H2_P_Z = 18.228149566112013
# Orientation:
H2_DX_X = -0.08016125505984917
H2_DX_Y = 0.4136203994480212
H2_DX_Z = -0.9069136333453685
H2_DY_X = 0.9753910911564105
H2_DY_Y = 0.22002820275108093
H2_DY_Z = 0.014135391286554722
H2_DZ_X = 0.20539326298573712
H2_DZ_Y = -0.8834623677070681
H2_DZ_Z = -0.42107938962324454
## Properties of helix 3
H3_INID = 1
H3_OUTID = 7
H3_INID2 = 2
H3_OUTID2 = 6
H3_INID2_ORIG = 151
H3_OUTID2_ORIG = 140
H3_INSEQ_CHAR = C
H3_OUTSEQ_CHAR = C
# Position:
H3_P_X = 102.2670930495247
H3_P_Y = 105.9239516883427
H3_P_Z = 16.719159929602803
# Orientation:
H3_DX_X = 0.7347413668716882
H3_DX_Y = -0.06594003385870906
H3_DX_Z = 0.6751348278249552
H3_DY_X = 0.6691435113067996
H3_DY_Y = 0.2338459251460705
H3_DY_Z = -0.705381488677272
H3_DZ_X = -0.11136464916438626
H3_DZ_Y = 0.9700350484530418
H3_DZ_Z = 0.21593962047110793
## Properties of helix 4
H4_INID = 1
H4_OUTID = 5
H4_INID2 = 2
H4_OUTID2 = 4
H4_INID2_ORIG = 106
H4_OUTID2_ORIG = 153
H4_INSEQ_CHAR = C
H4_OUTSEQ_CHAR = C
# Position:
H4_P_X = 112.17688005562991
H4_P_Y = 91.23073458800819
H4_P_Z = 13.706061421975145
# Orientation:
H4_DX_X = -0.5788350573200347
H4_DX_Y = -0.27235342799482964
H4_DX_Z = 0.7686179718668971
H4_DY_X = -0.6289878776434676
H4_DY_Y = -0.45075119481104764
H4_DY_Z = -0.6334016183701952
H4_DZ_X = 0.5189645712328286
H4_DZ_Y = -0.8500864489191002
H4_DZ_Z = 0.08960358904213628
#############  END of Description of junction: j1