#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 4
LILLEY = HS6HS12HS12HS16
FINGERPRINT = 7:74:76:79:85:138
LOOP_LENGTH_SUM = 46
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  446
S1_NAME_ID3 = 467
S1_NUM_ID5_ORIG =  446
S1_NUM_ID3_ORIG = 467
S1_NAME2_ID5 =  448
S1_NAME2_ID3 = 465
S1_NUM2_ID5_ORIG =  448
S1_NUM2_ID3_ORIG = 465
S1_SQ2 = GACCGAUAGUGAACAAGU
S1_SQLEN2 = 18
S1_SQ = GAGACCGAUAGUGAACAAGUAG
S1_SQLEN = 22
S1_CHAR = 0
## Properties of strand 2
S2_NAME_ID5 =  25
S2_NAME_ID3 = 36
S2_NUM_ID5_ORIG =  25
S2_NUM_ID3_ORIG = 36
S2_NAME2_ID5 =  27
S2_NAME2_ID3 = 34
S2_NUM2_ID5_ORIG =  27
S2_NUM2_ID3_ORIG = 34
S2_SQ2 = UGCUCGGC
S2_SQLEN2 = 8
S2_SQ = AUUGCUCGGCUC
S2_SQLEN = 12
S2_CHAR = 0
## Properties of strand 3
S3_NAME_ID5 =  474
S3_NAME_ID3 = 491
S3_NUM_ID5_ORIG =  474
S3_NUM_ID3_ORIG = 491
S3_NAME2_ID5 =  476
S3_NAME2_ID3 = 489
S3_NUM2_ID5_ORIG =  476
S3_NUM2_ID3_ORIG = 489
S3_SQ2 = AACGCUGCAAAGUA
S3_SQLEN2 = 14
S3_SQ = CGAACGCUGCAAAGUACC
S3_SQLEN = 18
S3_CHAR = 0
## Properties of strand 4
S4_NAME_ID5 =  501
S4_NAME_ID3 = 518
S4_NUM_ID5_ORIG =  501
S4_NUM_ID3_ORIG = 518
S4_NAME2_ID5 =  503
S4_NAME2_ID3 = 516
S4_NUM2_ID5_ORIG =  503
S4_NUM2_ID3_ORIG = 516
S4_SQ2 = GGCGAAAUAGAGCA
S4_SQLEN2 = 14
S4_SQ = GAGGCGAAAUAGAGCAUG
S4_SQLEN = 18
S4_CHAR = 0
## Properties of helix 1
H1_INID = 1
H1_OUTID = 12
H1_INID2 = 3
H1_OUTID2 = 10
H1_INID2_ORIG = 448
H1_OUTID2_ORIG = 34
H1_INSEQ_CHAR = 0
H1_OUTSEQ_CHAR = 0
# Position:
H1_P_X = 45.399107101498686
H1_P_Y = 127.42042713599932
H1_P_Z = 37.185024753395425
# Orientation:
H1_DX_X = -0.17106343736836038
H1_DX_Y = -0.939810979989133
H1_DX_Z = 0.295791518282023
H1_DY_X = -0.583560538466692
H1_DY_Y = -0.14524630769254543
H1_DY_Z = -0.7989747230333109
H1_DZ_X = 0.793847843317721
H1_DZ_Y = -0.3092876201750414
H1_DZ_Z = -0.5235902688804117
## Properties of helix 2
H2_INID = 1
H2_OUTID = 22
H2_INID2 = 3
H2_OUTID2 = 20
H2_INID2_ORIG = 476
H2_OUTID2_ORIG = 465
H2_INSEQ_CHAR = 0
H2_OUTSEQ_CHAR = 0
# Position:
H2_P_X = 63.22672276866548
H2_P_Y = 144.2714874863054
H2_P_Z = 56.18138858558306
# Orientation:
H2_DX_X = -0.6691080789928847
H2_DX_Y = 0.40574433942342125
H2_DX_Z = 0.6226282274779251
H2_DY_X = 0.23379617859044544
H2_DY_Y = -0.6803419586513542
H2_DY_Z = 0.6946036036294032
H2_DZ_X = 0.7054315881096898
H2_DZ_Y = 0.6103329831528868
H2_DZ_Z = 0.3603608249695682
## Properties of helix 3
H3_INID = 1
H3_OUTID = 18
H3_INID2 = 3
H3_OUTID2 = 16
H3_INID2_ORIG = 503
H3_OUTID2_ORIG = 489
H3_INSEQ_CHAR = 0
H3_OUTSEQ_CHAR = 0
# Position:
H3_P_X = 25.243355588491056
H3_P_Y = 171.61096720152977
H3_P_Z = 66.38296423846377
# Orientation:
H3_DX_X = -0.7040311171816889
H3_DX_Y = 0.6937844741812
H3_DX_Z = -0.15166835340649243
H3_DY_X = -0.3509178582540642
H3_DY_Y = -0.15418680788613415
H3_DY_Z = 0.9236249699051342
H3_DZ_X = 0.6174114048171546
H3_DZ_Y = 0.7034838531615435
H3_DZ_Z = 0.35201367238035175
## Properties of helix 4
H4_INID = 1
H4_OUTID = 18
H4_INID2 = 3
H4_OUTID2 = 16
H4_INID2_ORIG = 27
H4_OUTID2_ORIG = 516
H4_INSEQ_CHAR = 0
H4_OUTSEQ_CHAR = 0
# Position:
H4_P_X = 27.413035762066286
H4_P_Y = 141.83320252583943
H4_P_Z = 69.28809997864207
# Orientation:
H4_DX_X = -0.7560242331393994
H4_DX_Y = -0.6438958431855042
H4_DX_Z = -0.11758189501114202
H4_DY_X = 0.602417677865656
H4_DY_Y = -0.7547482601706292
H4_DY_Z = 0.25970753775041544
H4_DZ_X = -0.2559693346886789
H4_DZ_Y = 0.12551177991662144
H4_DZ_Z = 0.9585022132479395
#############  END of Description of junction: j1