############# Start of Description of junction: j88 # Number of strands: NUM_STRANDS = 2 LILLEY = HS5HS6 FINGERPRINT = 152 LOOP_LENGTH_SUM = 11 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 2416 S1_NAME_ID3 = 2425 S1_NUM_ID5_ORIG = 2416 S1_NUM_ID3_ORIG = 2425 S1_NAME2_ID5 = 2417 S1_NAME2_ID3 = 2424 S1_NUM2_ID5_ORIG = 2417 S1_NUM2_ID3_ORIG = 2424 S1_SQ2 = UACCCCGG S1_SQLEN2 = 8 S1_SQ = UUACCCCGGG S1_SQLEN = 10 S1_CHAR = 2 ## Properties of strand 2 S2_NAME_ID5 = 2047 S2_NAME_ID3 = 2055 S2_NUM_ID5_ORIG = 2047 S2_NUM_ID3_ORIG = 2055 S2_NAME2_ID5 = 2048 S2_NAME2_ID3 = 2054 S2_NUM2_ID5_ORIG = 2048 S2_NUM2_ID3_ORIG = 2054 S2_SQ2 = CCGUGGA S2_SQLEN2 = 7 S2_SQ = CCCGUGGAG S2_SQLEN = 9 S2_CHAR = 2 ## Properties of helix 1 H1_INID = 1 H1_OUTID = 9 H1_INID2 = 2 H1_OUTID2 = 8 H1_INID2_ORIG = 2417 H1_OUTID2_ORIG = 2054 H1_INSEQ_CHAR = 2 H1_OUTSEQ_CHAR = 2 # Position: H1_P_X = 53.76532201750615 H1_P_Y = 148.2451955089838 H1_P_Z = 100.60659735236368 # Orientation: H1_DX_X = -0.4900144416482135 H1_DX_Y = 0.0645212549257792 H1_DX_Z = 0.8693232164385165 H1_DY_X = 0.8500028172556853 H1_DY_Y = -0.18582073312836656 H1_DY_Z = 0.49291567818141857 H1_DZ_X = 0.1933418155329747 H1_DZ_Y = 0.9804629839022141 H1_DZ_Z = 0.036211594330765706 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 10 H2_INID2 = 2 H2_OUTID2 = 9 H2_INID2_ORIG = 2048 H2_OUTID2_ORIG = 2424 H2_INSEQ_CHAR = 2 H2_OUTSEQ_CHAR = 2 # Position: H2_P_X = 46.656300423342365 H2_P_Y = 126.77312219023382 H2_P_Z = 106.48997876037281 # Orientation: H2_DX_X = -0.18409840148908074 H2_DX_Y = -0.39894350677909074 H2_DX_Z = -0.898304991062588 H2_DY_X = 0.9611009884872743 H2_DY_Y = -0.26450905491931564 H2_DY_Z = -0.07949748294426229 H2_DZ_X = -0.20589479958937318 H2_DZ_Y = -0.8779971744057491 H2_DZ_Z = 0.4321206929060111 ############# END of Description of junction: j88