#############  Start of Description of junction: j5
# Number of strands:
NUM_STRANDS = 4
LILLEY = 3HS6HS2
FINGERPRINT = 59:65:107:112:128:170
LOOP_LENGTH_SUM = 8
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  237
S1_NAME_ID3 = 242
S1_NUM_ID5_ORIG =  237
S1_NUM_ID3_ORIG = 242
S1_NAME2_ID5 =  239
S1_NAME2_ID3 = 240
S1_NUM2_ID5_ORIG =  239
S1_NUM2_ID3_ORIG = 240
S1_SQ2 = UG
S1_SQLEN2 = 2
S1_SQ = GAUGGG
S1_SQLEN = 6
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  113
S2_NAME_ID3 = 124
S2_NUM_ID5_ORIG =  113
S2_NUM_ID3_ORIG = 124
S2_NAME2_ID5 =  115
S2_NAME2_ID3 = 122
S2_NUM2_ID5_ORIG =  115
S2_NUM2_ID3_ORIG = 122
S2_SQ2 = GAGUAAUG
S2_SQLEN2 = 8
S2_SQ = GUGAGUAAUGUC
S2_SQLEN = 12
S2_CHAR = A
## Properties of strand 3
S3_NAME_ID5 =  284
S3_NAME_ID3 = 291
S3_NUM_ID5_ORIG =  284
S3_NUM_ID3_ORIG = 291
S3_NAME2_ID5 =  286
S3_NAME2_ID3 = 289
S3_NUM2_ID5_ORIG =  286
S3_NUM2_ID3_ORIG = 289
S3_SQ2 = CUAG
S3_SQLEN2 = 4
S3_SQ = CCCUAGCU
S3_SQLEN = 8
S3_CHAR = A
## Properties of strand 4
S4_NAME_ID5 =  309
S4_NAME_ID3 = 314
S4_NUM_ID5_ORIG =  309
S4_NUM_ID3_ORIG = 314
S4_NAME2_ID5 =  311
S4_NAME2_ID3 = 312
S4_NUM2_ID5_ORIG =  311
S4_NUM2_ID3_ORIG = 312
S4_SQ2 = CC
S4_SQLEN2 = 2
S4_SQ = AGCCAC
S4_SQLEN = 6
S4_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 12
H1_INID2 = 3
H1_OUTID2 = 10
H1_INID2_ORIG = 239
H1_OUTID2_ORIG = 122
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 49.74717103856505
H1_P_Y = -23.0356026617629
H1_P_Z = 0.13176332758637344
# Orientation:
H1_DX_X = 0.780721302389658
H1_DX_Y = 0.22590703116615884
H1_DX_Z = 0.5826150197726521
H1_DY_X = -0.35551883649695526
H1_DY_Y = 0.927338296392108
H1_DY_Z = 0.11683338966423495
H1_DZ_X = -0.5138877356883
H1_DZ_Y = -0.2983449300964871
H1_DZ_Z = 0.8043069673917271
## Properties of helix 2
H2_INID = 1
H2_OUTID = 6
H2_INID2 = 3
H2_OUTID2 = 4
H2_INID2_ORIG = 286
H2_OUTID2_ORIG = 240
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 58.94111945869821
H2_P_Y = -15.106201001516482
H2_P_Z = -15.368767164420623
# Orientation:
H2_DX_X = 0.9278073011830159
H2_DX_Y = 0.321278858942172
H2_DX_Z = -0.18961409933944395
H2_DY_X = -0.03640130545391429
H2_DY_Y = -0.4278768917556377
H2_DY_Z = -0.903103709693843
H2_DZ_X = -0.37127962081528665
H2_DZ_Y = 0.8448084163278402
H2_DZ_Z = -0.3852923342981356
## Properties of helix 3
H3_INID = 1
H3_OUTID = 8
H3_INID2 = 3
H3_OUTID2 = 6
H3_INID2_ORIG = 311
H3_OUTID2_ORIG = 289
H3_INSEQ_CHAR = A
H3_OUTSEQ_CHAR = A
# Position:
H3_P_X = 69.81659144465513
H3_P_Y = -23.719626746035757
H3_P_Z = 8.263847258377583
# Orientation:
H3_DX_X = -0.855105500900109
H3_DX_Y = 0.4485164057946278
H3_DX_Z = -0.26005310239148116
H3_DY_X = -0.32988185251593904
H3_DY_Y = -0.08373267740769919
H3_DY_Z = 0.9403014421528813
H3_DZ_X = 0.3999656806664973
H3_DZ_Y = 0.8898437348586583
H3_DZ_Z = 0.21955769588373997
## Properties of helix 4
H4_INID = 1
H4_OUTID = 6
H4_INID2 = 3
H4_OUTID2 = 4
H4_INID2_ORIG = 115
H4_OUTID2_ORIG = 312
H4_INSEQ_CHAR = A
H4_OUTSEQ_CHAR = A
# Position:
H4_P_X = 63.04781794912786
H4_P_Y = -39.22329290561538
H4_P_Z = 6.411819790280283
# Orientation:
H4_DX_X = 0.10916921489106812
H4_DX_Y = 0.010117746463897959
H4_DX_Z = -0.9939716865819488
H4_DY_X = 0.9189676433751686
H4_DY_Y = -0.38220613982701934
H4_DY_Z = 0.09704090430336088
H4_DZ_X = -0.37892024615946696
H4_DZ_Y = -0.9240216977349718
H4_DZ_Z = -0.05102302583565965
#############  END of Description of junction: j5