#############  Start of Description of junction: j1
# Number of strands:
NUM_STRANDS = 2
LILLEY = HS2HS9
FINGERPRINT = 172
LOOP_LENGTH_SUM = 11
KISSING_LOOP = FALSE
INTERNAL_HELICES = NULL
## Properties of strand 1
S1_NAME_ID5 =  24
S1_NAME_ID3 = 38
S1_NUM_ID5_ORIG =  24
S1_NUM_ID3_ORIG = 38
S1_NAME2_ID5 =  26
S1_NAME2_ID3 = 36
S1_NUM2_ID5_ORIG =  26
S1_NUM2_ID3_ORIG = 36
S1_SQ2 = CUGAGAAAGUC
S1_SQLEN2 = 11
S1_SQ = GGCUGAGAAAGUCCC
S1_SQLEN = 15
S1_CHAR = A
## Properties of strand 2
S2_NAME_ID5 =  8
S2_NAME_ID3 = 15
S2_NUM_ID5_ORIG =  8
S2_NUM_ID3_ORIG = 15
S2_NAME2_ID5 =  10
S2_NAME2_ID3 = 13
S2_NUM2_ID5_ORIG =  10
S2_NUM2_ID3_ORIG = 13
S2_SQ2 = GGUG
S2_SQLEN2 = 4
S2_SQ = GGGGUGCU
S2_SQLEN = 8
S2_CHAR = A
## Properties of helix 1
H1_INID = 1
H1_OUTID = 8
H1_INID2 = 3
H1_OUTID2 = 6
H1_INID2_ORIG = 26
H1_OUTID2_ORIG = 13
H1_INSEQ_CHAR = A
H1_OUTSEQ_CHAR = A
# Position:
H1_P_X = 13.192169694439361
H1_P_Y = 24.683186500574998
H1_P_Z = -41.42934930231616
# Orientation:
H1_DX_X = -0.5166012891383005
H1_DX_Y = -0.06866453104759884
H1_DX_Z = 0.8534683885397669
H1_DY_X = 0.8559523548629748
H1_DY_Y = -0.06661792517105525
H1_DY_Z = 0.5127451786710822
H1_DZ_X = 0.021648886003237777
H1_DZ_Y = 0.9954130972726425
H1_DZ_Z = 0.09318847306884237
## Properties of helix 2
H2_INID = 1
H2_OUTID = 15
H2_INID2 = 3
H2_OUTID2 = 13
H2_INID2_ORIG = 10
H2_OUTID2_ORIG = 36
H2_INSEQ_CHAR = A
H2_OUTSEQ_CHAR = A
# Position:
H2_P_X = 8.364173165891307
H2_P_Y = 2.742685622491429
H2_P_Z = -60.87867432167931
# Orientation:
H2_DX_X = -0.6282461841937295
H2_DX_Y = -0.05511432553432272
H2_DX_Z = 0.7760600126065711
H2_DY_X = -0.7667209552575098
H2_DY_Y = 0.21320052027971848
H2_DY_Z = -0.6055448083515103
H2_DZ_X = -0.132082204762904
H2_DZ_Y = -0.9754526894080273
H2_DZ_Z = -0.17619972165589814
#############  END of Description of junction: j1