############# Start of Description of junction: j2 # Number of strands: NUM_STRANDS = 2 LILLEY = HS1HS2 FINGERPRINT = 158 LOOP_LENGTH_SUM = 3 KISSING_LOOP = FALSE INTERNAL_HELICES = NULL ## Properties of strand 1 S1_NAME_ID5 = 13 S1_NAME_ID3 = 20 S1_NUM_ID5_ORIG = 13 S1_NUM_ID3_ORIG = 20 S1_NAME2_ID5 = 15 S1_NAME2_ID3 = 18 S1_NUM2_ID5_ORIG = 15 S1_NUM2_ID3_ORIG = 18 S1_SQ2 = GAAG S1_SQLEN2 = 4 S1_SQ = GUGAAGUC S1_SQLEN = 8 S1_CHAR = A ## Properties of strand 2 S2_NAME_ID5 = 27 S2_NAME_ID3 = 33 S2_NUM_ID5_ORIG = 27 S2_NUM_ID3_ORIG = 33 S2_NAME2_ID5 = 29 S2_NAME2_ID3 = 31 S2_NUM2_ID5_ORIG = 29 S2_NUM2_ID3_ORIG = 31 S2_SQ2 = CAC S2_SQLEN2 = 3 S2_SQ = GUCACAC S2_SQLEN = 7 S2_CHAR = B ## Properties of helix 1 H1_INID = 1 H1_OUTID = 7 H1_INID2 = 3 H1_OUTID2 = 5 H1_INID2_ORIG = 15 H1_OUTID2_ORIG = 31 H1_INSEQ_CHAR = A H1_OUTSEQ_CHAR = B # Position: H1_P_X = 11.314041224365832 H1_P_Y = 2.6959689771410567 H1_P_Z = 12.586722443830977 # Orientation: H1_DX_X = -0.2853155896149442 H1_DX_Y = 0.12899552084317145 H1_DX_Z = 0.9497132040385008 H1_DY_X = 0.7877891734920865 H1_DY_Y = 0.5959340665890576 H1_DY_Z = 0.1557267042201982 H1_DZ_X = -0.5458784044559106 H1_DZ_Y = 0.7926050364973896 H1_DZ_Z = -0.2716505543297121 ## Properties of helix 2 H2_INID = 1 H2_OUTID = 8 H2_INID2 = 3 H2_OUTID2 = 6 H2_INID2_ORIG = 29 H2_OUTID2_ORIG = 18 H2_INSEQ_CHAR = B H2_OUTSEQ_CHAR = A # Position: H2_P_X = 21.682887382959887 H2_P_Y = -15.522362939498315 H2_P_Z = 15.049208943518565 # Orientation: H2_DX_X = -0.7296334703372658 H2_DX_Y = -0.31309922727976236 H2_DX_Z = -0.6079505513118768 H2_DY_X = 0.5102238497708917 H2_DY_Y = 0.3426735168500006 H2_DY_Z = -0.7888260162891605 H2_DZ_X = 0.4553093696472459 H2_DZ_Y = -0.8857447345180596 H2_DZ_Z = -0.09027537418896969 ############# END of Description of junction: j2